Detailed information of OS493_017587-T1 in Lophelia pertusa

Genomic Location: scaffold_56:2110196...2122971
NR annotation: KAJ7385208.1, hypothetical protein OS493_017587 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96SW2Protein cereblon OS=Homo sapiens OX=9606 GN=CRBN PE=1 SV=1
Q5R6Y2Protein cereblon OS=Pongo abelii OX=9601 GN=CRBN PE=2 SV=1
Q0P564Protein cereblon OS=Bos taurus OX=9913 GN=CRBN PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02190LON_substr_bdgATP-dependent protease La (LON) substrate-binding domain FamilyInterproscan
PF03226Yippee-Mis18Yippee zinc-binding/DNA-binding /Mis18, centromere assemblyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR034750DomainCULT domainInterproscan
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan
IPR003111DomainLon protease, N-terminal domainInterproscan
IPR004910DomainYippee/Mis18/CereblonInterproscan
IPR046336Homologous_superfamilyLon protease, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14255CEREBLONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0031464Cellular ComponentCul4A-RING E3 ubiquitin ligase complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11793CRBN; cereblon-Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_017587-T1 global co-expression network
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