Detailed information of OS493_017549-T1 in Lophelia pertusa

Genomic Location: scaffold_56:1646302...1651967
NR annotation: KAJ7385172.1, Gem-associated protein 5 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q54IY5Component of gems protein 5 OS=Dictyostelium discoideum OX=44689 GN=gemin5 PE=3 SV=1
Q62623Cell division cycle protein 20 homolog OS=Rattus norvegicus OX=10116 GN=Cdc20 PE=1 SV=2
Q9JJ66Cell division cycle protein 20 homolog OS=Mus musculus OX=10090 GN=Cdc20 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12894ANAPC4_WD40Anaphase-promoting complex subunit 4 WD40 domainRepeatInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR024977DomainAnaphase-promoting complex subunit 4-like, WD40 domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR052640FamilyWD repeat domain-containing protein Gemin-5Interproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46362GEM-ASSOCIATED PROTEIN 5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000387Biological Processspliceosomal snRNP assemblyInterproscan
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0032797Cellular ComponentSMN complexInterproscan

Expression pattern
 Expression trend for OS493_017549-T1 global co-expression network
TOP