Detailed information of OS493_017494-T1 in Lophelia pertusa

Genomic Location: scaffold_56:912830...915422
NR annotation: KAJ7385124.1, Pituitary homeobox 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9W751Pituitary homeobox 1 OS=Xenopus laevis OX=8355 GN=pitx1 PE=2 SV=1
Q9PWR3Pituitary homeobox 2 OS=Xenopus laevis OX=8355 GN=pitx2 PE=2 SV=1
Q99697Pituitary homeobox 2 OS=Homo sapiens OX=9606 GN=PITX2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45882PITUITARY HOMEOBOX HOMOLOG PTX1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09357PITX3; paired-like homeodomain transcription factor 3-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_017494-T1 global co-expression network
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