Detailed information of OS493_017492-T1 in Lophelia pertusa

Genomic Location: scaffold_56:885930...892600
NR annotation: KAJ7385123.1, hypothetical protein OS493_017492 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q566X8Diencephalon/mesencephalon homeobox protein 1-B OS=Danio rerio OX=7955 GN=dmbx1b PE=2 SV=1
Q8JI10Diencephalon/mesencephalon homeobox protein 1-A OS=Danio rerio OX=7955 GN=dmbx1a PE=2 SV=1
Q91ZK4Diencephalon/mesencephalon homeobox protein 1 OS=Mus musculus OX=10090 GN=Dmbx1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR052488FamilyDiencephalon/mesencephalon homeoboxInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46639DIENCEPHALON/MESENCEPHALON HOMEOBOX PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24893DMBX1; diencephalon/mesencephalon homeobox protein 1-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_017492-T1 global co-expression network
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