Detailed information of OS493_017490-T1 in Lophelia pertusa

Genomic Location: scaffold_56:863196...868587
NR annotation: KAJ7385121.1, sequence-specific DNA binding [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q566X8Diencephalon/mesencephalon homeobox protein 1-B OS=Danio rerio OX=7955 GN=dmbx1b PE=2 SV=1
F1NEA7Diencephalon/mesencephalon homeobox protein 1 OS=Gallus gallus OX=9031 GN=DMBX1 PE=2 SV=2
Q91ZK4Diencephalon/mesencephalon homeobox protein 1 OS=Mus musculus OX=10090 GN=Dmbx1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR052488FamilyDiencephalon/mesencephalon homeoboxInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46639DIENCEPHALON/MESENCEPHALON HOMEOBOX PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

Expression pattern
 Expression trend for OS493_017490-T1 global co-expression network
TOP