Detailed information of OS493_017477-T1 in Lophelia pertusa

Genomic Location: scaffold_56:684947...693154
NR annotation: KAJ7385109.1, hypothetical protein OS493_017477 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9QXH4Integrin alpha-X OS=Mus musculus OX=10090 GN=Itgax PE=1 SV=1
A2AX52Collagen alpha-4(VI) chain OS=Mus musculus OX=10090 GN=Col6a4 PE=1 SV=2
Q21540Cuticlin-6 OS=Caenorhabditis elegans OX=6239 GN=cut-6 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041fn3Fibronectin type III domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

Expression pattern
 Expression trend for OS493_017477-T1 global co-expression network
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