Detailed information of OS493_017446-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_017446-T1SEQUESTOSOME 1-RELATEDscaffold_56229364233472-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UFD|PB1

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00564PB1PB1 domainDomainInterproscan
PF00569ZZZinc finger, ZZ typeDomainInterproscan
PF16577UBA_5UBA domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000270DomainPB1 domainInterproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR033741DomainSequestosome-1, UBA domainInterproscan
IPR034866DomainSequestosome-1, PB1 domainInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR052260FamilyAutophagy Receptor and Signaling RegulatorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15090SEQUESTOSOME 1-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000423Biological ProcessmitophagyInterproscan
GO:0005080Molecular Functionprotein kinase C bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007032Biological Processendosome organizationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016235Cellular ComponentaggresomeInterproscan
GO:0035973Biological ProcessaggrephagyInterproscan
GO:0044753Cellular ComponentamphisomeInterproscan
GO:0070530Molecular FunctionK63-linked polyubiquitin modification-dependent protein bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_017446-T1 global RNA-seq network
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