Detailed information of OS493_017253-T1 in Lophelia pertusa

Genomic Location: scaffold_55:467544...482881
NR annotation: KAJ7391558.1, hypothetical protein OS493_017253 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q66HL2Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1
Q60598Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2
Q14247Src substrate cortactin OS=Homo sapiens OX=9606 GN=CTTN PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14604SH3_9Variant SH3 domainDomainInterproscan
PF02218HS1_repRepeat in HS1/CortactinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001452DomainSH3 domainInterproscan
IPR003134RepeatHs1/CortactinInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10829CORTACTIN AND DREBRINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005884Cellular Componentactin filamentInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0030427Cellular Componentsite of polarized growthInterproscan
GO:0030833Biological Processregulation of actin filament polymerizationInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06106CTTN, EMS1; cortactin-Cytoskeleton proteinsko04812deepkoala

Expression pattern
 Expression trend for OS493_017253-T1 global co-expression network
TOP