Detailed information of OS493_017244-T1 in Lophelia pertusa

Genomic Location: scaffold_55:414319...422436
NR annotation: KAJ7391550.1, hypothetical protein OS493_017244 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99816Tumor susceptibility gene 101 protein OS=Homo sapiens OX=9606 GN=TSG101 PE=1 SV=2
Q6IRE4Tumor susceptibility gene 101 protein OS=Rattus norvegicus OX=10116 GN=Tsg101 PE=1 SV=1
Q61187Tumor susceptibility gene 101 protein OS=Mus musculus OX=10090 GN=Tsg101 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyE2|UEV|UEV

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09454Vps23_coreVps23 core domainDomainInterproscan
PF05743UEVUEV domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016135Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR037202Homologous_superfamilyESCRT assembly domainInterproscan
IPR017916DomainSteadiness box (SB) domainInterproscan
IPR008883DomainUbiquitin E2 variant, N-terminalInterproscan
IPR052070FamilyESCRT-I complex UEV domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23306TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015031Biological Processprotein transportInterproscan
GO:0036211Biological Processprotein modification processInterproscan
GO:0000813Cellular ComponentESCRT I complexInterproscan
GO:0008333Biological Processendosome to lysosome transportInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12183TSG101, STP22, VPS23; ESCRT-I complex subunit TSG101-Exosomeko04147deepkoala

Expression pattern
 Expression trend for OS493_017244-T1 global co-expression network
TOP