Detailed information of OS493_017195-T1 in Lophelia pertusa

Genomic Location: scaffold_54:1915730...1916560
NR annotation: KAJ7333651.1, hypothetical protein OS493_017195 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q63245Forkhead box protein D3 (Fragment) OS=Rattus norvegicus OX=10116 GN=Foxd3 PE=1 SV=1
Q9PRJ8Forkhead box protein D5-A OS=Xenopus laevis OX=8355 GN=foxd5-a PE=2 SV=1
Q63251Forkhead box protein D1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Foxd1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00250ForkheadForkhead domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001766DomainFork head domainInterproscan
IPR047519DomainForkhead box protein Q2-like, forkhead domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR030456Conserved_siteFork head domain conserved site 2Interproscan
IPR050211FamilyForkhead box domain-containing proteinInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11829FORKHEAD BOX PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0030154Biological Processcell differentiationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08038FOXA3, HNF3G; forkhead box protein A3, hepatocyte nuclear factor 3-gamma-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_017195-T1 global co-expression network
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