Detailed information of OS493_017021-T1 in Lophelia pertusa

Genomic Location: scaffold_53:2164337...2175418
NR annotation: KAJ7360388.1, hypothetical protein OS493_017021 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P0CB38Polyadenylate-binding protein 4-like OS=Homo sapiens OX=9606 GN=PABPC4L PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR033102FamilyNegative elongation factor EInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17250NEGATIVE ELONGATION FACTOR EInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0032021Cellular ComponentNELF complexInterproscan
GO:0034244Biological Processnegative regulation of transcription elongation by RNA polymerase IIInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15182RDBP, NELFE; negative elongation factor E-Transcription machineryko03021deepkoala

Expression pattern
 Expression trend for OS493_017021-T1 global co-expression network
TOP