Detailed information of OS493_016741-T1 in Lophelia pertusa

Genomic Location: scaffold_52:524428...532646
NR annotation: KAJ7372820.1, hypothetical protein OS493_016741 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P06579Thrombomodulin (Fragment) OS=Bos taurus OX=9913 GN=THBD PE=2 SV=1
Q5W7P8Thrombomodulin OS=Canis lupus familiaris OX=9615 GN=THBD PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050751FamilyExtracellular matrix structural proteinInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24034EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06702CD93; CDW93 antigen-Lectinsko04091deepkoala

Expression pattern
 Expression trend for OS493_016741-T1 global co-expression network
TOP