Detailed information of OS493_016571-T1 in Lophelia pertusa

Genomic Location: scaffold_51:387712...396717
NR annotation: KAJ7379337.1, Lysine-specific demethylase 5A [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P29375Lysine-specific demethylase 5A OS=Homo sapiens OX=9606 GN=KDM5A PE=1 SV=3
Q3UXZ9Lysine-specific demethylase 5A OS=Mus musculus OX=10090 GN=Kdm5a PE=1 SV=2
Q5F3R2Lysine-specific demethylase 5B OS=Gallus gallus OX=9031 GN=KDM5B PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02375JmjNjmjN domainFamilyInterproscan
PF01388ARIDARID/BRIGHT DNA binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003349DomainJmjN domainInterproscan
IPR001606DomainARID DNA-binding domainInterproscan
IPR036431Homologous_superfamilyARID DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10694LYSINE-SPECIFIC DEMETHYLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000785Cellular ComponentchromatinInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0032452Molecular Functionhistone demethylase activityInterproscan
GO:0034647Molecular Functionhistone H3K4me/H3K4me2/H3K4me3 demethylase activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

Expression pattern
 Expression trend for OS493_016571-T1 global co-expression network
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