Detailed information of OS493_016569-T1 in Lophelia pertusa

Genomic Location: scaffold_51:369488...371836
NR annotation: KAJ7379335.1, Lysine-specific demethylase 5A [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P41230Lysine-specific demethylase 5C OS=Mus musculus OX=10090 GN=Kdm5c PE=1 SV=4
Q5XUN4Lysine-specific demethylase 5D OS=Pan troglodytes OX=9598 GN=KDM5D PE=2 SV=1
Q62240Lysine-specific demethylase 5D OS=Mus musculus OX=10090 GN=Kdm5d PE=2 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR037869FamilySpp1/CFP1Interproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46174CXXC-TYPE ZINC FINGER PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0048188Cellular ComponentSet1C/COMPASS complexInterproscan

Expression pattern
 Expression trend for OS493_016569-T1 global co-expression network
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