Detailed information of OS493_016543-T1 in Lophelia pertusa

Genomic Location: scaffold_50:2389389...2397581
NR annotation: KAJ7385459.1, hypothetical protein OS493_016543 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2VLH6Scavenger receptor cysteine-rich type 1 protein M130 OS=Mus musculus OX=10090 GN=Cd163 PE=1 SV=2
Q2VL90Scavenger receptor cysteine-rich type 1 protein M130 OS=Sus scrofa OX=9823 GN=CD163 PE=1 SV=1
P85521Scavenger receptor cysteine-rich type 1 protein M130 OS=Bos taurus OX=9913 GN=CD163 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006212RepeatFurin-like repeatInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR001190DomainSRCR domainInterproscan
IPR050686FamilySRCR-S1 Scavenger ReceptorInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR017448DomainSRCR-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48071SRCR DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan

Expression pattern
 Expression trend for OS493_016543-T1 global co-expression network
TOP