Detailed information of OS493_016466-T1 in Lophelia pertusa

Genomic Location: scaffold_50:1715460...1723127
NR annotation: KAJ7385385.1, hypothetical protein OS493_016466 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7YTC2Homeobox protein orthopedia OS=Saccoglossus kowalevskii OX=10224 GN=otp PE=2 SV=1
Q6SZ65Homeobox protein orthopedia OS=Lytechinus variegatus OX=7654 GN=Otp PE=2 SV=1
Q6SR69Homeobox protein orthopedia OS=Heliocidaris erythrogramma OX=7634 GN=Otp PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan
PF03826OAROAR motifMotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR000047Conserved_siteHelix-turn-helix motifInterproscan
IPR051895FamilyOrthopedia HomeoboxInterproscan
IPR003654DomainOAR domainInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46770HOMEOBOX PROTEIN ORTHOPEDIAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0030182Biological Processneuron differentiationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24901OTP; homeobox protein orthopedia-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_016466-T1 global co-expression network
TOP