Detailed information of OS493_016346-T1 in Lophelia pertusa

Genomic Location: scaffold_50:518893...539947
NR annotation: KAJ7385275.1, ligand-gated sodium channel [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O01635Degenerin-like protein asic-1 OS=Caenorhabditis elegans OX=6239 GN=asic-1 PE=3 SV=2
Q21974Degenerin unc-8 OS=Caenorhabditis elegans OX=6239 GN=unc-8 PE=2 SV=1
Q19038Degenerin del-1 OS=Caenorhabditis elegans OX=6239 GN=del-1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00858ASCAmiloride-sensitive sodium channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001873FamilyEpithelial sodium channelInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11690AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005272Molecular Functionsodium channel activityInterproscan
GO:0006814Biological Processsodium ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015280Molecular Functionligand-gated sodium channel activityInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04828ASIC2, ACCN1, BNAC1; acid-sensing ion channel 2-Ion channelsko04040deepkoala

Expression pattern
 Expression trend for OS493_016346-T1 global co-expression network
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