Detailed information of OS493_016227-T1 in Lophelia pertusa

Genomic Location: scaffold_49:1966084...1967062
NR annotation: KAJ7391922.1, hypothetical protein OS493_016227 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6QHK4Factor in the germline alpha OS=Homo sapiens OX=9606 GN=FIGLA PE=1 SV=2
Q96RJ6Fer3-like protein OS=Homo sapiens OX=9606 GN=FERD3L PE=1 SV=1
Q923Z4Fer3-like protein OS=Mus musculus OX=10090 GN=Ferd3l PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR050283FamilyE-box Binding Transcriptional RegulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23349BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWISTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0032502Biological Processdevelopmental processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09083ATOH1_7; atonal protein 1/7-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_016227-T1 global co-expression network
TOP