Detailed information of OS493_016213-T1 in Lophelia pertusa

Genomic Location: scaffold_49:1879279...1889381
NR annotation: KAJ7391916.1, WD repeat-containing protein 24 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7ZVL2GATOR2 complex protein WDR24 OS=Danio rerio OX=7955 GN=wdr24 PE=2 SV=1
Q7ZX22GATOR2 complex protein WDR24 OS=Xenopus laevis OX=8355 GN=wdr24 PE=2 SV=1
Q8CFJ9GATOR2 complex protein WDR24 OS=Mus musculus OX=10090 GN=Wdr24 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR037590FamilyGATOR2 complex protein WDR24Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46200GATOR COMPLEX PROTEIN WDR24Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005774Cellular Componentvacuolar membraneInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016239Biological Processpositive regulation of macroautophagyInterproscan
GO:0032008Biological Processpositive regulation of TOR signalingInterproscan
GO:0034198Biological Processcellular response to amino acid starvationInterproscan
GO:0061700Cellular ComponentGATOR2 complexInterproscan
GO:1904263Biological Processpositive regulation of TORC1 signalingInterproscan

Expression pattern
 Expression trend for OS493_016213-T1 global co-expression network
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