Detailed information of OS493_016178-T1 in Lophelia pertusa

Genomic Location: scaffold_49:1557118...1558581
NR annotation: KAJ7391887.1, hypothetical protein OS493_016178 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P09070Homeobox protein Hox-B4 OS=Xenopus laevis OX=8355 GN=hoxb4 PE=2 SV=1
P17278Homeobox protein Hox-D4 OS=Gallus gallus OX=9031 GN=HOXD4 PE=2 SV=1
P06798Homeobox protein Hox-A4 OS=Mus musculus OX=10090 GN=Hoxa4 PE=2 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000047Conserved_siteHelix-turn-helix motifInterproscan
IPR017995FamilyHomeobox protein, antennapedia typeInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001827Conserved_siteHomeobox protein, antennapedia type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45664PROTEIN ZERKNUELLT 1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

Expression pattern
 Expression trend for OS493_016178-T1 global co-expression network
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