Detailed information of OS493_016170-T1 in Lophelia pertusa

Genomic Location: scaffold_49:1462412...1469319
NR annotation: KAJ7391880.1, intercellular trafficking and secretion [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q91YJ2Sorting nexin-4 OS=Mus musculus OX=10090 GN=Snx4 PE=1 SV=1
Q5R4C2Sorting nexin-4 OS=Pongo abelii OX=9601 GN=SNX4 PE=2 SV=1
O95219Sorting nexin-4 OS=Homo sapiens OX=9606 GN=SNX4 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00787PXPX domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027267Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR036871Homologous_superfamilyPX domain superfamilyInterproscan
IPR001683DomainPhox homologyInterproscan
IPR034783FamilySorting nexin-4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46596SORTING NEXIN-4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0015031Biological Processprotein transportInterproscan
GO:0031201Cellular ComponentSNARE complexInterproscan
GO:0031901Cellular Componentearly endosome membraneInterproscan
GO:0032266Molecular Functionphosphatidylinositol-3-phosphate bindingInterproscan
GO:2000786Biological Processpositive regulation of autophagosome assemblyInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17919SNX4; sorting nexin-4-Domain-containing proteins not elsewhere classifiedko04990deepkoala

Expression pattern
 Expression trend for OS493_016170-T1 global co-expression network
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