Detailed information of OS493_016128-T1 in Lophelia pertusa

Genomic Location: scaffold_49:1083349...1089485
NR annotation: KAJ7391838.1, hypothetical protein OS493_016128 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18592Tho1_MOS11_CTho1/MOS11 C-terminal domainDomainInterproscan
PF02037SAPSAP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036361Homologous_superfamilySAP domain superfamilyInterproscan
IPR052240FamilySAP domain-containing ribonucleoproteinInterproscan
IPR003034DomainSAP domainInterproscan
IPR040746DomainTHO1_MOS11, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46551SAP DOMAIN-CONTAINING RIBONUCLEOPROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016973Biological Processpoly(A)+ mRNA export from nucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18732SARNP, CIP29, THO1; SAP domain-containing ribonucleoprotein-Messenger RNA biogenesisko03019deepkoala

Expression pattern
 Expression trend for OS493_016128-T1 global co-expression network
TOP