Detailed information of OS493_015911-T1 in Lophelia pertusa

Genomic Location: scaffold_48:1767646...1769407
NR annotation: KAJ7333819.1, protein ubiquitination [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P62869Elongin-B OS=Mus musculus OX=10090 GN=Elob PE=1 SV=1
P62870Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1
Q15370Elongin-B OS=Homo sapiens OX=9606 GN=ELOB PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000626DomainUbiquitin-like domainInterproscan
IPR039049FamilyElongin BInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13248TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0030891Cellular ComponentVCB complexInterproscan
GO:0070449Cellular Componentelongin complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03873ELOB, TCEB2; elongin-B-DNA repair and recombination proteinsko03400deepkoala

Expression pattern
 Expression trend for OS493_015911-T1 global co-expression network
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