Detailed information of OS493_015910-T1 in Lophelia pertusa

Genomic Location: scaffold_48:1763901...1767577
NR annotation: KAJ7333818.1, hypothetical protein OS493_015910 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZIR9E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus OX=9031 GN=RNF185 PE=2 SV=1
Q6PC78E3 ubiquitin-protein ligase RNF185 OS=Danio rerio OX=7955 GN=rnf185 PE=2 SV=1
Q96GF1E3 ubiquitin-protein ligase RNF185 OS=Homo sapiens OX=9606 GN=RNF185 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR045103FamilyE3 ubiquitin-protein ligase RNF5/RNF185-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12313E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0044390Molecular Functionubiquitin-like protein conjugating enzyme bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071712Biological Processobsolete ER-associated misfolded protein catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10666RNF5_185; E3 ubiquitin-protein ligase RNF5/185EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_015910-T1 global co-expression network
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