Detailed information of OS493_015852-T1 in Lophelia pertusa

Genomic Location: scaffold_48:1195534...1198473
NR annotation: KAJ7333761.1, hypothetical protein OS493_015852 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9D4H7LON peptidase N-terminal domain and RING finger protein 3 OS=Mus musculus OX=10090 GN=Lonrf3 PE=2 SV=1
Q496Y0LON peptidase N-terminal domain and RING finger protein 3 OS=Homo sapiens OX=9606 GN=LONRF3 PE=1 SV=1
D3YY23LON peptidase N-terminal domain and RING finger protein 1 OS=Mus musculus OX=10090 GN=Lonrf1 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF02190LON_substr_bdgATP-dependent protease La (LON) substrate-binding domain FamilyInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR046336Homologous_superfamilyLon protease, N-terminal domain superfamilyInterproscan
IPR003111DomainLon protease, N-terminal domainInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23327RING FINGER PROTEIN 127Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

Expression pattern
 Expression trend for OS493_015852-T1 global co-expression network
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