Detailed information of OS493_015729-T1 in Lophelia pertusa

Genomic Location: scaffold_47:2279899...2286740
NR annotation: KAJ7360621.1, Transcription factor e2f4 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6DE14Transcription factor E2F4 OS=Xenopus laevis OX=8355 GN=e2f4 PE=1 SV=1
Q8R0K9Transcription factor E2F4 OS=Mus musculus OX=10090 GN=E2f4 PE=1 SV=1
Q15329Transcription factor E2F5 OS=Homo sapiens OX=9606 GN=E2F5 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02319E2F_TDPE2F/DP family winged-helix DNA-binding domainDomainInterproscan
PF16421E2F_CC-MBE2F transcription factor CC-MB domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015633FamilyE2F FamilyInterproscan
IPR003316DomainE2F/DP family, winged-helix DNA-binding domainInterproscan
IPR037241Homologous_superfamilyE2F-DP heterodimerization regionInterproscan
IPR032198DomainE2F transcription factor, CC-MB domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12081TRANSCRIPTION FACTOR E2FInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0090575Cellular ComponentRNA polymerase II transcription regulator complexInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04682E2F4_5; transcription factor E2F4/5-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_015729-T1 global co-expression network
TOP