Detailed information of OS493_015545-T1 in Lophelia pertusa

Genomic Location: scaffold_47:381955...385844
NR annotation: KAJ7360444.1, E3 ubiquitin-protein ligase znrf2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F1MM41E3 ubiquitin-protein ligase ZNRF1 OS=Bos taurus OX=9913 GN=ZNRF1 PE=3 SV=2
Q8ND25E3 ubiquitin-protein ligase ZNRF1 OS=Homo sapiens OX=9606 GN=ZNRF1 PE=1 SV=2
Q91V17E3 ubiquitin-protein ligase ZNRF1 OS=Mus musculus OX=10090 GN=Znrf1 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR051878FamilyZNRF ubiquitin-protein ligaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46661E3 UBIQUITIN-PROTEIN LIGASE ZNRF1-LIKE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0070936Biological Processprotein K48-linked ubiquitinationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10694ZNRF1_2; E3 ubiquitin-protein ligase ZNRF1/2EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_015545-T1 global co-expression network
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