Detailed information of OS493_015222-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_015222-T1ACTIN-BINDING LIM PROTEINscaffold_4424363362455123+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00089TrypsinTrypsinDomainInterproscan
PF00412LIMLIM domainDomainInterproscan
PF02209VHPVillin headpiece domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001254DomainSerine proteases, trypsin domainInterproscan
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR003128DomainVillin headpieceInterproscan
IPR009003Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR017896Domain4Fe-4S ferredoxin-type, iron-sulphur binding domainInterproscan
IPR036886Homologous_superfamilyVillin headpiece domain superfamilyInterproscan
IPR043504Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR051618FamilyActin-binding LIMInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24213ACTIN-BINDING LIM PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003779Molecular Functionactin bindingInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0007010Biological Processcytoskeleton organizationInterproscan
GO:0015629Cellular Componentactin cytoskeletonInterproscan
GO:0030032Biological Processlamellipodium assemblyInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_015222-T1 global RNA-seq network
TOP