Detailed information of OS493_015222-T1 in Lophelia pertusa

Genomic Location: scaffold_44:2436336...2455123
NR annotation: KAJ7385633.1, Actin-binding LIM protein 3 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6H8Q1Actin-binding LIM protein 2 OS=Homo sapiens OX=9606 GN=ABLIM2 PE=1 SV=2
Q8BL65Actin-binding LIM protein 2 OS=Mus musculus OX=10090 GN=Ablim2 PE=1 SV=1
Q6KC51Actin-binding LIM protein 2 OS=Rattus norvegicus OX=10116 GN=Ablim2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02209VHPVillin headpiece domainDomainInterproscan
PF00089TrypsinTrypsinDomainInterproscan
PF00412LIMLIM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001254DomainSerine proteases, trypsin domainInterproscan
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR051618FamilyActin-binding LIMInterproscan
IPR003128DomainVillin headpieceInterproscan
IPR036886Homologous_superfamilyVillin headpiece domain superfamilyInterproscan
IPR009003Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR043504Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR017896Domain4Fe-4S ferredoxin-type, iron-sulphur binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24213ACTIN-BINDING LIM PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0015629Cellular Componentactin cytoskeletonInterproscan
GO:0030032Biological Processlamellipodium assemblyInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0007010Biological Processcytoskeleton organizationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07520ABLIM; actin-binding LIM protein-Axon guidanceko04360deepkoala

Expression pattern
 Expression trend for OS493_015222-T1 global co-expression network
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