Detailed information of OS493_015174-T1 in Lophelia pertusa

Genomic Location: scaffold_44:1691089...1706174
NR annotation: KAJ7385590.1, ATP-dependent RNA helicase supv3l1, mitochondrial [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZJT0ATP-dependent RNA helicase SUPV3L1, mitochondrial OS=Gallus gallus OX=9031 GN=SUPV3L1 PE=2 SV=1
A4IG62ATP-dependent RNA helicase SUPV3L1, mitochondrial OS=Danio rerio OX=7955 GN=supv3l1 PE=2 SV=1
Q80YD1ATP-dependent RNA helicase SUPV3L1, mitochondrial OS=Mus musculus OX=10090 GN=Supv3l1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18114Suv3_NSuv3 helical N-terminal domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF12513SUV3_CMitochondrial degradasome RNA helicase subunit C terminalFamilyInterproscan
PF18147Suv3_C_1Suv3 C-terminal domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041453DomainSuv3, N-terminalInterproscan
IPR050699FamilyRNA/DNA HelicaseInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR022192DomainMitochondrial degradasome RNA helicase subunit, C-terminal domainInterproscan
IPR044774DomainSuv3, DEXQ-box helicase domainInterproscan
IPR041082DomainSuv3, C-terminal domain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12131ATP-DEPENDENT RNA AND DNA HELICASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000965Biological Processmitochondrial RNA 3'-end processingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan
GO:0045025Cellular Componentmitochondrial degradosomeInterproscan
GO:0016817Molecular Functionhydrolase activity, acting on acid anhydridesInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17675SUPV3L1, SUV3; ATP-dependent RNA helicase SUPV3L1/SUV3EC:5.6.2.6
Mitochondrial biogenesisko03029deepkoala

Expression pattern
 Expression trend for OS493_015174-T1 global co-expression network
TOP