Detailed information of OS493_015166-T1 in Lophelia pertusa

Genomic Location: scaffold_44:1631939...1640360
NR annotation: KAJ7385582.1, Vesicular integral-membrane protein VIP36 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P49256Vesicular integral-membrane protein VIP36 OS=Canis lupus familiaris OX=9615 GN=LMAN2 PE=1 SV=1
Q12907Vesicular integral-membrane protein VIP36 OS=Homo sapiens OX=9606 GN=LMAN2 PE=1 SV=1
Q9DBH5Vesicular integral-membrane protein VIP36 OS=Mus musculus OX=10090 GN=Lman2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03388Lectin_leg-likeLegume-like lectin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005052DomainLegume-like lectinInterproscan
IPR051136FamilyIntracellular Lectin and Glycoprotein TransporterInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12223VESICULAR MANNOSE-BINDING LECTINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0000139Cellular ComponentGolgi membraneInterproscan
GO:0005537Molecular FunctionD-mannose bindingInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0005793Cellular Componentendoplasmic reticulum-Golgi intermediate compartmentInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0030134Cellular ComponentCOPII-coated ER to Golgi transport vesicleInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10082LMAN2, VIP36; lectin, mannose-binding 2-Lectinsko04091deepkoala

Expression pattern
 Expression trend for OS493_015166-T1 global co-expression network
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