Detailed information of OS493_015164-T1 in Lophelia pertusa

Genomic Location: scaffold_44:1609073...1619902
NR annotation: KAJ7385580.1, Catenin alpha-1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5R416Catenin alpha-2 OS=Pongo abelii OX=9601 GN=CTNNA2 PE=2 SV=3
P26232Catenin alpha-2 OS=Homo sapiens OX=9606 GN=CTNNA2 PE=1 SV=5
Q61301Catenin alpha-2 OS=Mus musculus OX=10090 GN=Ctnna2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01044VinculinVinculin familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036723Homologous_superfamilyAlpha-catenin/vinculin-like superfamilyInterproscan
IPR006077FamilyVinculin/alpha-cateninInterproscan
IPR001033FamilyAlpha-cateninInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18914ALPHA CATENINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007155Biological Processcell adhesionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0008013Molecular Functionbeta-catenin bindingInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan

Expression pattern
 Expression trend for OS493_015164-T1 global co-expression network
TOP