Detailed information of OS493_014803-T1 in Lophelia pertusa

Genomic Location: scaffold_42:1608945...1613980
NR annotation: KAJ7334482.1, LIM/homeobox protein Lhx8 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8IRC7LIM/homeobox protein Awh OS=Drosophila melanogaster OX=7227 GN=Awh PE=1 SV=1
G5EEA1LIM/homeobox protein lim-4 OS=Caenorhabditis elegans OX=6239 GN=lim-4 PE=1 SV=1
Q68G74LIM/homeobox protein Lhx8 OS=Homo sapiens OX=9606 GN=LHX8 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR050453FamilyLIM/homeobox transcription factorsInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24208LIM/HOMEOBOX PROTEIN LHXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030182Biological Processneuron differentiationInterproscan

Expression pattern
 Expression trend for OS493_014803-T1 global co-expression network
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