Detailed information of OS493_014639-T1 in Lophelia pertusa

Genomic Location: scaffold_42:100155...103642
NR annotation: KAJ7334329.1, Zinc finger protein Gfi-1b [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O42409Zinc finger protein Gfi-1b OS=Gallus gallus OX=9031 GN=GFI1B PE=2 SV=1
O70237Zinc finger protein Gfi-1b OS=Mus musculus OX=10090 GN=Gfi1b PE=1 SV=1
P70338Zinc finger protein Gfi-1 OS=Mus musculus OX=10090 GN=Gfi1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF13912zf-C2H2_6C2H2-type zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR050826FamilyKrueppel C2H2-type Zinc FingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24377IP01015P-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

Expression pattern
 Expression trend for OS493_014639-T1 global co-expression network
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