Detailed information of OS493_014635-T1 in Lophelia pertusa

Genomic Location: scaffold_42:61110...68552
NR annotation: KAJ7334325.1, RNA polymerase II associated protein 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8VC34Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2 OS=Mus musculus OX=10090 GN=Rpap2 PE=1 SV=2
Q8IXW5Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 OS=Homo sapiens OX=9606 GN=RPAP2 PE=1 SV=1
Q5RA37Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 OS=Pongo abelii OX=9601 GN=RPAP2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04181RPAP2_Rtr1Rtr1/RPAP2 familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007308DomainRtr1/RPAP2 domainInterproscan
IPR038534Homologous_superfamilyRtr1/RPAP2 domain superfamilyInterproscan
IPR039693FamilyRtr1/RPAP2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14732UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008420Molecular FunctionRNA polymerase II CTD heptapeptide repeat phosphatase activityInterproscan
GO:0043175Molecular FunctionRNA polymerase core enzyme bindingInterproscan
GO:0070940Biological Processobsolete dephosphorylation of RNA polymerase II C-terminal domainInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20827RPAP2; RNA polymerase II-associated protein 2EC:3.1.3.16
Transcription machineryko03021deepkoala

Expression pattern
 Expression trend for OS493_014635-T1 global co-expression network
TOP