Detailed information of OS493_014531-T1 in Lophelia pertusa

Genomic Location: scaffold_41:1492518...1500006
NR annotation: KAJ7361885.1, DNA mismatch repair protein msh6 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E1BYJ2DNA mismatch repair protein Msh6 OS=Gallus gallus OX=9031 GN=MSH6 PE=3 SV=2
P52701DNA mismatch repair protein Msh6 OS=Homo sapiens OX=9606 GN=MSH6 PE=1 SV=2
P54276DNA mismatch repair protein Msh6 OS=Mus musculus OX=10090 GN=Msh6 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00488MutS_VMutS domain VDomainInterproscan
PF05190MutS_IVMutS family domain IVDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045076FamilyDNA mismatch repair MutS familyInterproscan
IPR000432DomainDNA mismatch repair protein MutS, C-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036187Homologous_superfamilyDNA mismatch repair protein MutS, core domain superfamilyInterproscan
IPR007861DomainDNA mismatch repair protein MutS, clampInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0032301Cellular ComponentMutSalpha complexInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

Expression pattern
 Expression trend for OS493_014531-T1 global co-expression network
TOP