Detailed information of OS493_014511-T1 in Lophelia pertusa

Genomic Location: scaffold_41:1289486...1308981
NR annotation: KAJ7361866.1, Sorbin and SH3 domain-containing protein 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O60504Vinexin OS=Homo sapiens OX=9606 GN=SORBS3 PE=1 SV=2
Q3UTJ2Sorbin and SH3 domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sorbs2 PE=1 SV=2
O35413Sorbin and SH3 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Sorbs2 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14604SH3_9Variant SH3 domainDomainInterproscan
PF07653SH3_2Variant SH3 domainDomainInterproscan
PF00018SH3_1SH3 domainDomainInterproscan
PF00595PDZPDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR001452DomainSH3 domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR050384FamilyEndophilin/SH3RFInterproscan
IPR001478DomainPDZ domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14167SH3 DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

Expression pattern
 Expression trend for OS493_014511-T1 global co-expression network
TOP