Detailed information of OS493_014394-T1 in Lophelia pertusa

Genomic Location: scaffold_41:350470...351129
NR annotation: KAJ7361754.1, ATPdependent RNA helicase [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9H5Z1Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens OX=9606 GN=DHX35 PE=1 SV=2
Q5RBD4Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii OX=9601 GN=DHX35 PE=2 SV=1
Q9BKQ8Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis elegans OX=6239 GN=ddx-35 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07717OB_NTP_bindOligonucleotide/oligosaccharide-binding (OB)-foldDomainInterproscan
PF21010HA2_CHelicase associated domain (HA2), ratchet-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011709DomainDEAD-box helicase, OB foldInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR007502DomainHelicase-associated domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18934ATP-DEPENDENT RNA HELICASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005622Cellular Componentintracellular anatomical structureInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan

Expression pattern
 Expression trend for OS493_014394-T1 global co-expression network
TOP