Detailed information of OS493_014353-T1 in Lophelia pertusa

Genomic Location: scaffold_40:2527503...2532049
NR annotation: KAJ7373205.1, DNA binding [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P97273Thyroid transcription factor 1 (Fragment) OS=Cavia porcellus OX=10141 GN=TITF1 PE=2 SV=1
P43699Homeobox protein Nkx-2.1 OS=Homo sapiens OX=9606 GN=NKX2-1 PE=1 SV=1
P43698Thyroid transcription factor 1 OS=Canis lupus familiaris OX=9615 GN=TITF1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR050394FamilyHomeobox NK-like transcription regulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24340HOMEOBOX PROTEIN NKXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan

Expression pattern
 Expression trend for OS493_014353-T1 global co-expression network
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