Detailed information of OS493_014322-T1 in Lophelia pertusa

Genomic Location: scaffold_40:2096669...2114323
NR annotation: KAJ7373174.1, Ubiquitin conjugation factor E4 A [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6P7A2Ubiquitin conjugation factor E4 A OS=Rattus norvegicus OX=10116 GN=Ube4a PE=2 SV=1
A5PKG6Ubiquitin conjugation factor E4 A OS=Bos taurus OX=9913 GN=UBE4A PE=2 SV=1
Q14139Ubiquitin conjugation factor E4 A OS=Homo sapiens OX=9606 GN=UBE4A PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10408Ufd2P_coreUbiquitin elongating factor coreFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045132FamilyUbiquitin conjugation factor E4Interproscan
IPR019474DomainUbiquitin conjugation factor E4, coreInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13931UBIQUITINATION FACTOR E4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030433Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0034450Molecular Functionubiquitin-ubiquitin ligase activityInterproscan
GO:0036503Biological ProcessERAD pathwayInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan

Expression pattern
 Expression trend for OS493_014322-T1 global co-expression network
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