Detailed information of OS493_014155-T1 in Lophelia pertusa

Genomic Location: scaffold_39:2476914...2492813
NR annotation: KAJ7379748.1, Ubiquitin carboxyl-terminal hydrolase 5 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P56399Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1
P45974Ubiquitin carboxyl-terminal hydrolase 5 OS=Homo sapiens OX=9606 GN=USP5 PE=1 SV=2
Q5R407Ubiquitin carboxyl-terminal hydrolase 5 OS=Pongo abelii OX=9601 GN=UBP5 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|UBA
Ubiquitin FamilyDUB|USP|USP
Ubiquitin FamilyUBD|ZnF|ZnF_UBP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF02148zf-UBPZn-finger in ubiquitin-hydrolases and other proteinDomainInterproscan
PF00627UBAUBA/TS-N domainDomainInterproscan
PF17807zf-UBP_varVariant UBP zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001607DomainZinc finger, UBP-typeInterproscan
IPR015940DomainUbiquitin-associated domainInterproscan
IPR050185FamilyUbiquitin carboxyl-terminal hydrolaseInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR016652FamilyUbiquitinyl hydrolaseInterproscan
IPR041432DomainUbiquitinyl hydrolase, variant UBP zinc fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11836USP5_13, UBP14; ubiquitin carboxyl-terminal hydrolase 5/13EC:3.4.19.12
Exosomeko04147deepkoala

Expression pattern
 Expression trend for OS493_014155-T1 global co-expression network
TOP