Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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Genomic Location: scaffold_39:909799...938360
NR annotation: KAJ7379630.1, hypothetical protein OS493_014026 [Desmophyllum pertusum]
| CDS | |
| OS493_014026-T1 | |
| Transcript |
| OS493_014026-T1 |
| Protein |
| OS493_014026-T1 |
| Uniprot term | Description |
|---|---|
| Q9P2R6 | Arginine-glutamic acid dipeptide repeats protein OS=Homo sapiens OX=9606 GN=RERE PE=1 SV=2 |
| Q62901 | Arginine-glutamic acid dipeptide repeats protein OS=Rattus norvegicus OX=10116 GN=Rere PE=1 SV=2 |
| Q80TZ9 | Arginine-glutamic acid dipeptide repeats protein OS=Mus musculus OX=10090 GN=Rere PE=1 SV=3 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00320 | GATA | GATA zinc finger | Domain | Interproscan |
| PF00249 | Myb_DNA-binding | Myb-like DNA-binding domain | Domain | Interproscan |
| PF01448 | ELM2 | ELM2 domain | Family | Interproscan |
| PF01426 | BAH | BAH domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR043151 | Homologous_superfamily | Bromo adjacent homology (BAH) domain superfamily | Interproscan |
| IPR013088 | Homologous_superfamily | Zinc finger, NHR/GATA-type | Interproscan |
| IPR000949 | Domain | ELM2 domain | Interproscan |
| IPR000679 | Domain | Zinc finger, GATA-type | Interproscan |
| IPR001025 | Domain | Bromo adjacent homology (BAH) domain | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR001005 | Domain | SANT/Myb domain | Interproscan |
| IPR017884 | Domain | SANT domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13859 | ATROPHIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0043565 | Molecular Function | sequence-specific DNA binding | Interproscan |
| GO:0003682 | Molecular Function | chromatin binding | Interproscan |
| GO:0003714 | Molecular Function | transcription corepressor activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K05628 | RERE; arginine-glutamic acid dipeptide repeats protein | - | Transcription factors | ko03000 | deepkoala |
| Expression trend for OS493_014026-T1 global co-expression network |