Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
Genomic Location: scaffold_39:745360...766817
NR annotation: KAJ7379614.1, meiotic chromosome condensation [Desmophyllum pertusum]
| CDS | |
| OS493_014009-T1 | |
| Transcript |
| OS493_014009-T1 |
| Protein |
| OS493_014009-T1 |
| Uniprot term | Description |
|---|---|
| Q9YHY6 | Condensin complex subunit 1 OS=Xenopus laevis OX=8355 GN=ncapd2 PE=1 SV=1 |
| Q15021 | Condensin complex subunit 1 OS=Homo sapiens OX=9606 GN=NCAPD2 PE=1 SV=3 |
| Q8K2Z4 | Condensin complex subunit 1 OS=Mus musculus OX=10090 GN=Ncapd2 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12717 | Cnd1 | non-SMC mitotic condensation complex subunit 1 | Repeat | Interproscan |
| PF12922 | Cnd1_N | non-SMC mitotic condensation complex subunit 1, N-term | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR026971 | Family | Condensin subunit 1/Condensin-2 complex subunit D3 | Interproscan |
| IPR011989 | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR032682 | Domain | Condensin complex subunit 1, C-terminal | Interproscan |
| IPR024324 | Domain | Condensin complex subunit 1, N-terminal | Interproscan |
| IPR007673 | Family | Condensin subunit 1 | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14222 | CONDENSIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000779 | Cellular Component | condensed chromosome, centromeric region | Interproscan |
| GO:0000799 | Cellular Component | condensin complex | Interproscan |
| GO:0007076 | Biological Process | mitotic chromosome condensation | Interproscan |
| GO:0010032 | Biological Process | meiotic chromosome condensation | Interproscan |
| GO:0042393 | Molecular Function | histone binding | Interproscan |
| GO:0000278 | Biological Process | mitotic cell cycle | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0030261 | Biological Process | chromosome condensation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K06677 | YCS4, CNAP1, CAPD2; condensin complex subunit 1 | - | Chromosome and associated proteins | ko03036 | deepkoala |
| Expression trend for OS493_014009-T1 global co-expression network |