Detailed information of OS493_013981-T1 in Lophelia pertusa

Genomic Location: scaffold_39:367719...377051
NR annotation: KAJ7379586.1, RNA polymerase II subunit A C-terminal domain phosphatase [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZJQ7RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Gallus gallus OX=9031 GN=SSU72 PE=2 SV=1
Q6PC19RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Danio rerio OX=7955 GN=ssu72 PE=2 SV=1
Q17QI2RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Bos taurus OX=9913 GN=SSU72 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04722Ssu72Ssu72-like proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006811FamilyRNA polymerase II subunit AInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20383RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004721Molecular Functionphosphoprotein phosphatase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan
GO:0005847Cellular ComponentmRNA cleavage and polyadenylation specificity factor complexInterproscan
GO:0006369Biological Processtermination of RNA polymerase II transcriptionInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0008420Molecular FunctionRNA polymerase II CTD heptapeptide repeat phosphatase activityInterproscan
GO:0070940Biological Processobsolete dephosphorylation of RNA polymerase II C-terminal domainInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15544SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72EC:3.1.3.16
Messenger RNA biogenesisko03019deepkoala

Expression pattern
 Expression trend for OS493_013981-T1 global co-expression network
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