Detailed information of OS493_013830-T1 in Lophelia pertusa

Genomic Location: scaffold_38:1697808...1703504
NR annotation: KAJ7385796.1, Cartilage matrix protein [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6UXI7Vitrin OS=Homo sapiens OX=9606 GN=VIT PE=1 SV=1
Q8VHI5Vitrin OS=Mus musculus OX=10090 GN=Vit PE=1 SV=2
Q95LI2Vitrin OS=Bos taurus OX=9913 GN=VIT PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001304DomainC-type lectin-likeInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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Expression pattern
 Expression trend for OS493_013830-T1 global co-expression network
TOP