Detailed information of OS493_013707-T1 in Lophelia pertusa

Genomic Location: scaffold_38:343201...351277
NR annotation: KAJ7385679.1, hypothetical protein OS493_013707 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q28DT7Polycomb protein eed OS=Xenopus tropicalis OX=8364 GN=eed PE=2 SV=1
Q6AZS2Polycomb protein eed-B OS=Xenopus laevis OX=8355 GN=eed-b PE=1 SV=2
Q5ZKH3Polycomb protein EED OS=Gallus gallus OX=9031 GN=EED PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR051243FamilyPolycomb group WD repeat-containing proteinInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10253POLYCOMB PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0006342Biological Processheterochromatin formationInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0035098Cellular ComponentESC/E(Z) complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11462EED; polycomb protein EED-Chromosome and associated proteinsko03036deepkoala

Expression pattern
 Expression trend for OS493_013707-T1 global co-expression network
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