| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_013681-T1 | - | scaffold_38 | 142088 | 148073 | - |
| CDS | |||||
| OS493_013681-T1 | |||||
| Transcript |
| OS493_013681-T1 |
| Protein |
| OS493_013681-T1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity|RBR |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00643 | zf-B_box | B-box zinc finger | Domain | Interproscan |
| PF01485 | IBR | IBR domain, a half RING-finger domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000315 | Domain | B-box-type zinc finger | Interproscan |
| IPR002867 | Domain | IBR domain | Interproscan |
| IPR003977 | Family | E3 ubiquitin-protein ligase parkin | Interproscan |
| IPR044066 | Domain | TRIAD supradomain | Interproscan |
| IPR047534 | Domain | E3 ubiquitin-protein ligase parkin, BRcat domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| - | - | - |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0005739 | Cellular Component | mitochondrion | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_013681-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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