Detailed information of OS493_013594-T1 in Lophelia pertusa

Genomic Location: scaffold_37:1879839...1892813
NR annotation: KAJ7392218.1, hypothetical protein OS493_013594 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P13796Plastin-2 OS=Homo sapiens OX=9606 GN=LCP1 PE=1 SV=6
Q63598Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2
Q61233Plastin-2 OS=Mus musculus OX=10090 GN=Lcp1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR001589Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR039959FamilyFimbrin/PlastinInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19961FIMBRIN/PLASTINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005884Cellular Componentactin filamentInterproscan
GO:0032432Cellular Componentactin filament bundleInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0051017Biological Processactin filament bundle assemblyInterproscan
GO:0051639Biological Processactin filament network formationInterproscan

Expression pattern
 Expression trend for OS493_013594-T1 global co-expression network
TOP