Detailed information of OS493_013538-T1 in Lophelia pertusa

Genomic Location: scaffold_37:821349...835314
NR annotation: KAJ7392166.1, Zinc finger CCHC domain-containing protein 7 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2KIN0Zinc finger CCHC domain-containing protein 7 OS=Bos taurus OX=9913 GN=ZCCHC7 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00098zf-CCHCZinc knuckleDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR051644FamilyTRAMP complex component and AT-rich DNA-binding proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46543ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0031499Cellular ComponentTRAMP complexInterproscan
GO:0043629Biological Processobsolete ncRNA polyadenylationInterproscan
GO:0071031Biological Processnuclear mRNA surveillance of mRNA 3'-end processingInterproscan
GO:0071035Biological Processnuclear polyadenylation-dependent rRNA catabolic processInterproscan
GO:0071036Biological Processnuclear polyadenylation-dependent snoRNA catabolic processInterproscan
GO:0071037Biological Processnuclear polyadenylation-dependent snRNA catabolic processInterproscan
GO:0071038Biological ProcessTRAMP-dependent tRNA surveillance pathwayInterproscan
GO:0071039Biological Processnuclear polyadenylation-dependent CUT catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12597AIR1_2; protein AIR1/2-Transfer RNA biogenesisko03016deepkoala

Expression pattern
 Expression trend for OS493_013538-T1 global co-expression network
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