Detailed information of OS493_013468-T1 in Lophelia pertusa

Genomic Location: scaffold_37:92782...103531
NR annotation: KAJ7392101.1, Sorting nexin-9 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8WV41Sorting nexin-33 OS=Homo sapiens OX=9606 GN=SNX33 PE=1 SV=1
Q28GP7Sorting nexin-33 OS=Xenopus tropicalis OX=8364 GN=snx33 PE=2 SV=1
Q6NRL2Sorting nexin-33 OS=Xenopus laevis OX=8355 GN=snx33 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00787PXPX domainDomainInterproscan
PF14604SH3_9Variant SH3 domainDomainInterproscan
PF10456BAR_3_WASP_bdgWASP-binding domain of Sorting nexin proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001683DomainPhox homologyInterproscan
IPR001452DomainSH3 domainInterproscan
IPR036871Homologous_superfamilyPX domain superfamilyInterproscan
IPR019497DomainSorting nexin protein, WASP-binding domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR027267Homologous_superfamilyAH/BAR domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45827SORTING NEXINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006897Biological ProcessendocytosisInterproscan
GO:0016197Biological Processendosomal transportInterproscan
GO:0031410Cellular Componentcytoplasmic vesicleInterproscan
GO:0097320Biological Processplasma membrane tubulationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17923SNX9_18_33; sorting nexin-9/18/33-Domain-containing proteins not elsewhere classifiedko04990deepkoala

Expression pattern
 Expression trend for OS493_013468-T1 global co-expression network
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