Detailed information of OS493_013445-T1 in Lophelia pertusa

Genomic Location: scaffold_36:2829642...2843607
NR annotation: KAJ7336067.1, Ubiquitin carboxyl-terminal hydrolase bap1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
C4A0D9Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Branchiostoma floridae OX=7739 GN=BAP1 PE=3 SV=1
Q66JB6Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Xenopus tropicalis OX=8364 GN=bap1 PE=2 SV=1
D3ZHS6Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Rattus norvegicus OX=10116 GN=Bap1 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyDUB|UCH|UCH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01088Peptidase_C12Ubiquitin carboxyl-terminal hydrolase, family 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR001578DomainPeptidase C12, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR036959Homologous_superfamilyPeptidase C12, ubiquitin carboxyl-terminal hydrolase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10589UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05610UCHL5, UCH37; ubiquitin carboxyl-terminal hydrolase L5EC:3.4.19.12
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_013445-T1 global co-expression network
TOP